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Installation

To install the PyLipID Python package, you need a few Python package dependencies. These dependencies include:

• mdtraj

• numpy

• pandas

• matplotlib

• seaborn

• networkx

• scipy

• python-louvain

• logomaker

• statsmodels

• scikit-learn

• tqdm

• kneebow

If these dependencies are not available in their required versions, the installation will fail. We thus recommend using the package installer pip:

$ pip install pylipid

If you know what you are doing and want to build from the source, the package is also available for download on Github via:

$ git clone git://github.com/wlsong/PyLipID.git